Biopeak
Identification of Impulse-Like Gene Expression Changes in Short Genomic Series Data
Enables the user to systematically identify and visualize impulse-like gene expression changes within short genomic series experiments. In order to detect such activation peaks, the gene expression is treated as a signal that propagates along an experimental axis (time, temperature or other series conditions). Peaks are selected by exhaustive identification of local maximums and subsequent filtering based on a range of controllable parameters. Moreover, the 'Biopeak' package provides a series of data exploration tools including: expression profile plots, correlation heat maps and clustering functionalities.
- Version1.0
- R version≥ 2.10
- LicenseGPL-2
- LicenseGPL-3
- Needs compilation?No
- Last release08/21/2019
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Team
David Lauenstein
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- Depends1 package
- Imports7 packages
- Suggests2 packages