CDROM
Phylogenetically Classifies Retention Mechanisms of Duplicate Genes from Gene Expression Data
Classification is based on the recently developed phylogenetic approach by Assis and Bachtrog (2013). The method classifies the evolutionary mechanisms retaining pairs of duplicate genes (conservation, neofunctionalization, subfunctionalization, or specialization) by comparing gene expression profiles of duplicate genes in one species to those of their single- copy ancestral genes in a sister species.
- Version1.1
- R version≥ 3.2.0
- LicenseGPL-2
- Needs compilation?No
- Last release04/27/2016
Team
Raquel Assis
Brent Perry
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Dependencies
- Depends1 package
- Imports4 packages