SpaCCI

Provides tools for analyzing spatial cell-cell interactions based on ligand-receptor pairs, including functions for local, regional, and global analysis using spatial transcriptomics data. Integrates with databases like 'CellChat' http://www.cellchat.org/, 'CellPhoneDB' https://www.cellphonedb.org/, 'Cellinker' https://www.rna-society.org/cellinker/, 'ICELLNET' https://github.com/soumelis-lab/ICELLNET, and 'ConnectomeDB' https://humanconnectome.org/software/connectomedb/ to identify ligand-receptor pairs, visualize interactions through heatmaps, chord diagrams, and infer interactions on different spatial scales.

Last 30 days

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Last 365 days

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.