TFMPvalue

Efficient and Accurate P-Value Computation for Position Weight Matrices

CRAN Package

In putative Transcription Factor Binding Sites (TFBSs) identification from sequence/alignments, we are interested in the significance of certain match score. TFMPvalue provides the accurate calculation of P-value with score threshold for Position Weight Matrices, or the score with given P-value. It is an interface to code originally made available by Helene Touzet and Jean-Stephane Varre, 2007, Algorithms Mol Biol:2, 15. doi:10.1186/1748-7188-2-15.

  • Version0.0.9
  • R versionunknown
  • LicenseGPL-2
  • Needs compilation?Yes
  • Last release10/21/2022

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