BAMMtools
Analysis and Visualization of Macroevolutionary Dynamics on Phylogenetic Trees
Provides functions for analyzing and visualizing complex macroevolutionary dynamics on phylogenetic trees. It is a companion package to the command line program BAMM (Bayesian Analysis of Macroevolutionary Mixtures) and is entirely oriented towards the analysis, interpretation, and visualization of evolutionary rates. Functionality includes visualization of rate shifts on phylogenies, estimating evolutionary rates through time, comparing posterior distributions of evolutionary rates across clades, comparing diversification models using Bayes factors, and more.
- Version2.1.12
- R version≥ 2.10
- LicenseGPL-2
- LicenseGPL-3
- Needs compilation?Yes
- Last release09/12/2024
Documentation
Team
Pascal Title
Dan Rabosky
Show author detailsRolesAuthorMichael Grundler
Show author detailsRolesAuthorCarlos Anderson
Show author detailsRolesAuthorJeff Shi
Show author detailsRolesAuthorJoseph Brown
Huateng Huang
Show author detailsRolesAuthorJon Mitchell
Show author detailsRolesAuthor
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Dependencies
- Depends1 package
- Imports2 packages
- Reverse Imports2 packages
- Reverse Suggests1 package