BICORN

Integrative Inference of De Novo Cis-Regulatory Modules

CRAN Package

Prior transcription factor binding knowledge and target gene expression data are integrated in a Bayesian framework for functional cis-regulatory module inference. Using Gibbs sampling, we iteratively estimate transcription factor associations for each gene, regulation strength for each binding event and the hidden activity for each transcription factor.

  • Version0.1.0
  • R version≥ 3.4
  • LicenseGPL-2
  • Needs compilation?No
  • Last release06/06/2018

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