BacArena

Modeling Framework for Cellular Communities in their Environments

CRAN Package

Can be used for simulation of organisms living in communities (Bauer and Zimmermann (2017) ). Each organism is represented individually and genome scale metabolic models determine the uptake and release of compounds. Biological processes such as movement, diffusion, chemotaxis and kinetics are available along with data analysis techniques.


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  • Depends5 packages
  • Imports12 packages
  • Suggests3 packages
  • Linking To3 packages