BioM2
Biologically Explainable Machine Learning Framework
Biologically Explainable Machine Learning Framework for Phenotype Prediction using omics data described in Chen and Schwarz (2017) doi:10.48550/arXiv.1712.00336.Identifying reproducible and interpretable biological patterns from high-dimensional omics data is a critical factor in understanding the risk mechanism of complex disease. As such, explainable machine learning can offer biological insight in addition to personalized risk scoring.In this process, a feature space of biological pathways will be generated, and the feature space can also be subsequently analyzed using WGCNA (Described in Horvath and Zhang (2005) doi:10.2202/1544-6115.1128 and Langfelder and Horvath (2008) doi:10.1186/1471-2105-9-559 ) methods.
- Version1.1.0
- R version≥ 4.1.0
- LicenseMIT
- LicenseLICENSE
- Needs compilation?No
- Last release09/20/2024
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Shunjie Zhang
Junfang Chen
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- Imports19 packages