ClussCluster
Simultaneous Detection of Clusters and Cluster-Specific Genes in High-Throughput Transcriptome Data
Implements a new method 'ClussCluster' descried in Ge Jiang and Jun Li, "Simultaneous Detection of Clusters and Cluster-Specific Genes in High-throughput Transcriptome Data" (Unpublished). Simultaneously perform clustering analysis and signature gene selection on high-dimensional transcriptome data sets. To do so, 'ClussCluster' incorporates a Lasso-type regularization penalty term to the objective function of K-means so that cell-type-specific signature genes can be identified while clustering the cells.
- Version0.1.0
- R version≥ 2.10.0
- LicenseGPL-3
- Needs compilation?No
- Last release07/02/2019
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Team
Li Jun
Jiang Ge
Show author detailsRolesAuthorWang Chuanqi
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- Imports5 packages
- Suggests2 packages