ClussCluster

Simultaneous Detection of Clusters and Cluster-Specific Genes in High-Throughput Transcriptome Data

CRAN Package

Implements a new method 'ClussCluster' descried in Ge Jiang and Jun Li, "Simultaneous Detection of Clusters and Cluster-Specific Genes in High-throughput Transcriptome Data" (Unpublished). Simultaneously perform clustering analysis and signature gene selection on high-dimensional transcriptome data sets. To do so, 'ClussCluster' incorporates a Lasso-type regularization penalty term to the objective function of K-means so that cell-type-specific signature genes can be identified while clustering the cells.

  • Version0.1.0
  • R version≥ 2.10.0
  • LicenseGPL-3
  • Needs compilation?No
  • Last release07/02/2019

Documentation


Team


Insights

Last 30 days

Last 365 days

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Data provided by CRAN


Binaries


Dependencies

  • Imports5 packages
  • Suggests2 packages