DIscBIO

A User-Friendly Pipeline for Biomarker Discovery in Single-Cell Transcriptomics

CRAN Package

An open, multi-algorithmic pipeline for easy, fast and efficient analysis of cellular sub-populations and the molecular signatures that characterize them. The pipeline consists of four successive steps: data pre-processing, cellular clustering with pseudo-temporal ordering, defining differential expressed genes and biomarker identification. More details on Ghannoum et. al. (2021) doi:10.3390/ijms22031399. This package implements extensions of the work published by Ghannoum et. al. (2019) doi:10.1101/700989.


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  • Imports16 packages
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