EpiSemble

Ensemble Based Machine Learning Approach for Predicting Methylation States

CRAN Package

DNA methylation (6mA) is a major epigenetic process by which alteration in gene expression took place without changing the DNA sequence. Predicting these sites in-vitro is laborious, time consuming as well as costly. This 'EpiSemble' package is an in-silico pipeline for predicting DNA sequences containing the 6mA sites. It uses an ensemble-based machine learning approach by combining Support Vector Machine (SVM), Random Forest (RF) and Gradient Boosting approach to predict the sequences with 6mA sites in it. This package has been developed by using the concept of Chen et al. (2019) doi:10.1093/bioinformatics/btz015.

  • Version0.1.1
  • R versionunknown
  • LicenseGPL-3
  • Needs compilation?No
  • Last release06/04/2023

Documentation


Team


Insights

Last 30 days

This package has been downloaded 200 times in the last 30 days. Enough downloads to make a small wave in the niche community. The curiosity is spreading! The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 4 times.

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0 downloadsMar 9, 2025
0 downloadsMar 10, 2025
0 downloadsMar 11, 2025
0 downloadsMar 12, 2025
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9 downloadsMar 15, 2025
3 downloadsMar 16, 2025
10 downloadsMar 17, 2025
5 downloadsMar 18, 2025
2 downloadsMar 19, 2025
12 downloadsMar 20, 2025
7 downloadsMar 21, 2025
6 downloadsMar 22, 2025
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5 downloadsMar 24, 2025
4 downloadsMar 25, 2025
4 downloadsMar 26, 2025
8 downloadsMar 27, 2025
5 downloadsMar 28, 2025
7 downloadsMar 29, 2025
6 downloadsMar 30, 2025
2 downloadsMar 31, 2025
6 downloadsApr 1, 2025
7 downloadsApr 2, 2025
2 downloadsApr 3, 2025
5 downloadsApr 4, 2025
4 downloadsApr 5, 2025
16 downloadsApr 6, 2025
6 downloadsApr 7, 2025
7 downloadsApr 8, 2025
5 downloadsApr 9, 2025
3 downloadsApr 10, 2025
11 downloadsApr 11, 2025
22 downloadsApr 12, 2025
4 downloadsApr 13, 2025
0 downloadsApr 14, 2025
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0 downloadsApr 16, 2025
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0 downloadsApr 18, 2025
0 downloadsApr 19, 2025
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The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Last 365 days

This package has been downloaded 2,361 times in the last 365 days. That's enough downloads to impress a room full of undergrads. A commendable achievement indeed. The day with the most downloads was Aug 07, 2024 with 30 downloads.

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Data provided by CRAN


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Dependencies

  • Imports16 packages