FiRE

Finder of Rare Entities (FiRE)

CRAN Package

The algorithm assigns rareness/ outlierness score to every sample in voluminous datasets. The algorithm makes multiple estimations of the proximity between a pair of samples, in low-dimensional spaces. To compute proximity, FiRE uses Sketching, a variant of locality sensitive hashing. For more details: Jindal, A., Gupta, P., Jayadeva and Sengupta, D., 2018. Discovery of rare cells from voluminous single cell expression data. Nature Communications, 9(1), p.4719. doi:10.1038/s41467-018-07234-6.

  • Version1.0.1
  • R versionunknown
  • LicenseGPL-3
  • Needs compilation?Yes
  • Last release09/06/2021

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