FishResp
Analytical Tool for Aquatic Respirometry
Calculates metabolic rate of fish and other aquatic organisms measured using an intermittent-flow respirometry approach. The tool is used to run a set of graphical QC tests of raw respirometry data, correct it for background respiration and chamber effect, filter and extract target values of absolute and mass-specific metabolic rate. Experimental design should include background respiration tests and measuring of one or more metabolic rate traits. The R package is ideally integrated with the pump controller 'PumpResp' and the DO meter 'SensResp' (open-source hardware by FishResp). Raw respirometry data can be also imported from 'AquaResp' (free software), 'AutoResp' ('LoligoSystems'), 'OxyView' ('PreSens'), 'Pyro Oxygen Logger' ('PyroScience') and 'Q-box Aqua' ('QubitSystems'). More information about the R package 'FishResp'is available in the publication by Morozov et al. (2019)
- Version1.1.1
- R version≥ 3.0.0
- LicenseGPL-3
- Needs compilation?No
- FishResp citation info
- Last release09/18/2022
Documentation
Team
Sergey Morozov
Scott McCairns
Show author detailsRolesAuthor, Thesis advisorJuha Merila
Show author detailsRolesThesis advisorFederico Calboli
Show author detailsRolesContributorJenni Prokkola
Show author detailsRolesdtcStephen White
Show author detailsRolesdtcDaniel Montgomery
Show author detailsRolesdtcLaura Almodovar-Acevedo
Show author detailsRolesdtcNiclas Kolm
Show author detailsRolesdtcAlexander Kotrschal
Show author detailsRolesdtcErik Gill
Show author detailsRolesdtc
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- Depends1 package
- Imports5 packages
- Reverse Suggests1 package