GenoPop
Genotype Imputation and Population Genomics Efficiently from Variant Call Formatted (VCF) Files
Tools for efficient processing of large, whole genome genotype data sets in variant call format (VCF). It includes several functions to calculate commonly used population genomic metrics and a method for reference panel free genotype imputation, which is described in the preprint Gurke & Mayer (2024) doi:10.22541/au.172515591.10119928/v1.
- Version1.0.0
- R versionunknown
- LicenseGPL (≥ 3)
- Needs compilation?No
- GenoPop citation info
- Last release11/25/2024
Documentation
Team
Marie Gurke
MaintainerShow author details
Insights
Last 30 days
This package has been downloaded 193 times in the last 30 days. More than a random curiosity, but not quite a blockbuster. Still, it's gaining traction! The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 5 times.
The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.
Last 365 days
This package has been downloaded 1,198 times in the last 365 days. Now we’re talking! This work is officially 'heard of in academic circles', just like those wild research papers on synthetic bananas. The day with the most downloads was Sep 14, 2024 with 32 downloads.
The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.
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Dependencies
- Imports3 packages
- Suggests4 packages