GeoTcgaData
Processing various types of data on GEO and TCGA
Gene Expression Omnibus(GEO) and The Cancer Genome Atlas (TCGA) provide us with a wealth of data, such as RNA-seq, DNA Methylation, SNP and Copy number variation data. It's easy to download data from TCGA using the gdc tool, but processing these data into a format suitable for bioinformatics analysis requires more work. This R package was developed to handle these data.
- Version1.1.1.992
- R version≥ 3.6.0
- LicenseArtistic-2.0
- Needs compilation?No
- Languageen-US
- Last release09/23/2022
Documentation
Team
Erqiang Hu
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- Depends1 package
- Imports7 packages
- Suggests16 packages