HeritSeq
Heritability of Gene Expression for Next-Generation Sequencing
Statistical framework to analyze heritability of gene expression based on next-generation sequencing data and simulating sequencing reads. Variance partition coefficients (VPC) are computed using linear mixed effects and generalized linear mixed effects models. Compound Poisson and negative binomial models are included. Reference: Rudra, Pratyaydipta, et al. "Model based heritability scores for high-throughput sequencing data." BMC bioinformatics 18.1 (2017): 143.
- Version1.0.2
- R version≥ 3.2.3
- LicenseGPL-2
- Needs compilation?No
- Last release07/12/2021
Team
W. Jenny Shi
Pamela Russell
Show author detailsRolesAuthorPratyaydipta Rudra
Show author detailsRolesAuthor, MaintainerBrian Vestal
Show author detailsRolesAuthor, MaintainerKaterina Kechris
Show author detailsRolesAuthorLaura Saba
Show author detailsRolesAuthor
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- Imports5 packages