InteRD
The Integrated and Robust Deconvolution
We developed the Integrated and Robust Deconvolution algorithm to infer cell-type proportions from target bulk RNA-seq data. This package is able to effectively integrate deconvolution results from multiple scRNA-seq datasets and calibrates estimates from reference-based deconvolution by taking into account extra biological information as priors. Moreover, the proposed algorithm is robust to inaccurate external information imposed in the deconvolution system.
- Version0.1.1
- R version≥ 3.5.0
- LicenseArtistic-2.0
- Needs compilation?No
- Last release08/12/2022
Documentation
Team
Chixiang Chen
Yuk Yee Leung
Show author detailsRolesAuthorMatei Lonita
Show author detailsRolesAuthorLi-San Wang
Show author detailsRolesAuthorMingyao Li
Show author detailsRolesAuthor
Insights
Last 30 days
Last 365 days
The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.
Data provided by CRAN
Binaries
Dependencies
- Depends2 packages
- Imports9 packages
- Suggests3 packages