LDheatmap

Graphical Display of Pairwise Linkage Disequilibria Between SNPs

CRAN Package

Produces a graphical display, as a heat map, of measures of pairwise linkage disequilibria between single nucleotide polymorphisms (SNPs). Users may optionally include the physical locations or genetic map distances of each SNP on the plot. The methods are described in Shin et al. (2006) . Users should note that the imported package 'snpStats' and the suggested packages 'rtracklayer', 'GenomicRanges', 'GenomInfoDb' and 'IRanges' are all BioConductor packages .

  • Version1.0-6
  • R version≥ 4.0
  • LicenseGPL-3
  • Needs compilation?Yes
  • Last release04/24/2022

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  • Depends1 package
  • Imports4 packages
  • Suggests8 packages
  • Linking To1 package