MAPITR

MArginal ePIstasis Test for Regions

CRAN Package

A genetic analysis tool and variance component model for identifying marginal epistasis between pathways and the rest of the genome. 'MAPITR' uses as input a matrix of genotypes, a vector of phenotypes, and a list of pathways. 'MAPITR' then iteratively tests each pathway for epistasis between any variants within the pathway versus any variants remaining in the rest of the genome. 'MAPITR' returns results in the form of p-values for every pathway indicating whether the null model of there being no epistatic interactions between a pathway and the rest of the genome can be rejected.

  • Version1.1.2
  • R version≥ 3.3.0
  • LicenseMIT
  • Needs compilation?Yes
  • Last release09/28/2020

Documentation


Team


Insights

Last 30 days

This package has been downloaded 196 times in the last 30 days. Enough downloads to make a small wave in the niche community. The curiosity is spreading! The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 13 times.

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0 downloadsFeb 9, 2025
0 downloadsFeb 10, 2025
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15 downloadsFeb 12, 2025
10 downloadsFeb 13, 2025
6 downloadsFeb 14, 2025
4 downloadsFeb 15, 2025
1 downloadsFeb 16, 2025
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10 downloadsFeb 19, 2025
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2 downloadsFeb 28, 2025
8 downloadsMar 1, 2025
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4 downloadsMar 10, 2025
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3 downloadsMar 12, 2025
13 downloadsMar 13, 2025
0 downloadsMar 14, 2025
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The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Last 365 days

This package has been downloaded 2,315 times in the last 365 days. That's enough downloads to impress a room full of undergrads. A commendable achievement indeed. The day with the most downloads was Sep 11, 2024 with 31 downloads.

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Data provided by CRAN


Binaries


Dependencies

  • Imports3 packages
  • Suggests3 packages
  • Linking To2 packages