MixTwice

Large-Scale Hypothesis Testing by Variance Mixing

CRAN Package

Implements large-scale hypothesis testing by variance mixing. It takes two statistics per testing unit – an estimated effect and its associated squared standard error – and fits a nonparametric, shape-constrained mixture separately on two latent parameters. It reports local false discovery rates (lfdr) and local false sign rates (lfsr). Manuscript describing algorithm of MixTwice: Zheng et al(2021) doi:10.1093/bioinformatics/btab162.

  • Version2.0
  • R version≥ 3.5.0
  • LicenseGPL-2
  • Needs compilation?No
  • Last release03/02/2022

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  • Imports4 packages