PAMhm

Generate Heatmaps Based on Partitioning Around Medoids (PAM)

CRAN Package

Data are partitioned (clustered) into k clusters "around medoids", which is a more robust version of K-means implemented in the function pam() in the 'cluster' package. The PAM algorithm is described in Kaufman and Rousseeuw (1990) doi:10.1002/9780470316801. Please refer to the pam() function documentation for more references. Clustered data is plotted as a split heatmap allowing visualisation of representative "group-clusters" (medoids) in the data as separated fractions of the graph while those "sub-clusters" are visualised as a traditional heatmap based on hierarchical clustering.

  • Version0.1.2
  • R versionunknown
  • LicenseGPL-3
  • Needs compilation?No
  • Last release09/06/2021

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  • Depends2 packages
  • Imports6 packages
  • Suggests2 packages