PRECAST
Embedding and Clustering with Alignment for Spatial Datasets
An efficient data integration method is provided for multiple spatial transcriptomics data with non-cluster-relevant effects such as the complex batch effects. It unifies spatial factor analysis simultaneously with spatial clustering and embedding alignment, requiring only partially shared cell/domain clusters across datasets. More details can be referred to Wei Liu, et al. (2023) doi:10.1038/s41467-023-35947-w.
- Version1.6.5
- R version≥ 4.0.0
- LicenseGPL-3
- Needs compilation?Yes
- Last release03/19/2024
Documentation
Team
Wei Liu
MaintainerShow author detailsYi Yang
Show author detailsRolesAuthorJin Liu
Show author detailsRolesAuthor
Insights
Last 30 days
Last 365 days
The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.
Data provided by CRAN
Binaries
Dependencies
- Depends1 package
- Imports17 packages
- Suggests2 packages
- Linking To2 packages
- Reverse Imports1 package