PepMapViz
A Versatile Toolkit for Peptide Mapping, Visualization, and Comparative Exploration
A versatile R visualization package that empowers researchers with comprehensive visualization tools for seamlessly mapping peptides to protein sequences, identifying distinct domains and regions of interest, accentuating mutations, and highlighting post-translational modifications, all while enabling comparisons across diverse experimental conditions. Potential applications of 'PepMapViz' include the visualization of cross-software mass spectrometry results at the peptide level for specific protein and domain details in a linearized format and post-translational modification coverage across different experimental conditions; unraveling insights into disease mechanisms. It also enables visualization of major histocompatibility complex-presented peptides in different antibody regions predicting immunogenicity in antibody drug development.
- Version1.0.0
- R versionunknown
- LicenseMIT
- LicenseLICENSE
- Needs compilation?No
- Last release11/13/2024
Documentation
Team
Zhenru Zhou
Qui Phung
Show author detailsRolesContributorCorey Bakalarski
Show author detailsRolesAuthorGenentech, Inc.
Show author detailsRolesCopyright holder
Insights
Last 30 days
This package has been downloaded 531 times in the last 30 days. This could be a paper that people cite without reading. Reaching the medium popularity echelon is no small feat! The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 26 times.
The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.
Last 365 days
This package has been downloaded 2,276 times in the last 365 days. Consider this 'mid-tier influencer' status—if it were a TikTok, it would get a nod from nieces and nephews. The day with the most downloads was Feb 17, 2025 with 52 downloads.
The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.
Data provided by CRAN
Binaries
Dependencies
- Imports7 packages
- Suggests3 packages