PhylogeneticEM

Automatic Shift Detection using a Phylogenetic EM

CRAN Package

Implementation of the automatic shift detection method for Brownian Motion (BM) or Ornstein–Uhlenbeck (OU) models of trait evolution on phylogenies. Some tools to handle equivalent shifts configurations are also available. See Bastide et al. (2017) doi:10.1111/rssb.12206 and Bastide et al. (2018) doi:10.1093/sysbio/syy005.


Documentation


Team


Insights

Last 30 days

This package has been downloaded 426 times in the last 30 days. More than a random curiosity, but not quite a blockbuster. Still, it's gaining traction! The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 6 times.

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0 downloadsFeb 9, 2025
0 downloadsFeb 10, 2025
0 downloadsFeb 11, 2025
0 downloadsFeb 12, 2025
9 downloadsFeb 13, 2025
18 downloadsFeb 14, 2025
23 downloadsFeb 15, 2025
26 downloadsFeb 16, 2025
50 downloadsFeb 17, 2025
28 downloadsFeb 18, 2025
10 downloadsFeb 19, 2025
55 downloadsFeb 20, 2025
10 downloadsFeb 21, 2025
4 downloadsFeb 22, 2025
13 downloadsFeb 23, 2025
12 downloadsFeb 24, 2025
6 downloadsFeb 25, 2025
27 downloadsFeb 26, 2025
7 downloadsFeb 27, 2025
3 downloadsFeb 28, 2025
17 downloadsMar 1, 2025
3 downloadsMar 2, 2025
14 downloadsMar 3, 2025
14 downloadsMar 4, 2025
23 downloadsMar 5, 2025
11 downloadsMar 6, 2025
5 downloadsMar 7, 2025
1 downloadsMar 8, 2025
1 downloadsMar 9, 2025
1 downloadsMar 10, 2025
19 downloadsMar 11, 2025
4 downloadsMar 12, 2025
6 downloadsMar 13, 2025
6 downloadsMar 14, 2025
0 downloadsMar 15, 2025
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55

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Last 365 days

This package has been downloaded 3,526 times in the last 365 days. Now we’re talking! This work is officially 'heard of in academic circles', just like those wild research papers on synthetic bananas. The day with the most downloads was Jul 21, 2024 with 74 downloads.

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Data provided by CRAN


Binaries


Dependencies

  • Depends2 packages
  • Imports9 packages
  • Suggests7 packages
  • Linking To2 packages