QuICSeedR
Analyze Data for Fluorophore-Assisted Seed Amplification Assays
A toolkit for analysis and visualization of data from fluorophore-assisted seed amplification assays, such as Real-Time Quaking-Induced Conversion (RT-QuIC) and Fluorophore-Assisted Protein Misfolding Cyclic Amplification (PMCA). 'QuICSeedR' addresses limitations in existing software by automating data processing, supporting large-scale analysis, and enabling comparative studies of analysis methods. It incorporates methods described in Henderson et al. (2015) doi:10.1099/vir.0.069906-0, Li et al. (2020) doi:10.1038/s41598-021-96127-8, Rowden et al. (2023) doi:10.3390/pathogens12020309, Haley et al. (2013) doi:10.1371/journal.pone.0081488, and Mair and Wilcox (2020) doi:10.3758/s13428-019-01246-w. Please refer to the original publications for details.
- Version0.1.2
- R versionunknown
- LicenseGPL-3
- Needs compilation?No
- Last release09/02/2024
Documentation
Team
Manci Li
Insights
Last 30 days
This package has been downloaded 117 times in the last 30 days. More than a random curiosity, but not quite a blockbuster. Still, it's gaining traction! The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 5 times.
The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.
Last 365 days
This package has been downloaded 888 times in the last 365 days. Not bad! The download count is somewhere between 'small-town buzz' and 'moderate academic conference'. The day with the most downloads was Sep 05, 2024 with 45 downloads.
The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.
Data provided by CRAN
Binaries
Dependencies
- Imports8 packages
- Suggests1 package