QuasiSeq

Analyzing RNA Sequencing Count Tables Using Quasi-Likelihood

CRAN Package

Identify differentially expressed genes in RNA-seq count data using quasi-Poisson or quasi-negative binomial models with 'QL', 'QLShrink' and 'QLSpline' methods described by Lund, Nettleton, McCarthy, and Smyth (2012) . Report bias-reduced estimates of log fold changes.


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  • Depends1 package
  • Imports6 packages
  • Enhances1 package
  • Suggests2 packages