RCPA

Consensus Pathway Analysis

CRAN Package

Provides a set of functions to perform pathway analysis and meta-analysis from multiple gene expression datasets, as well as visualization of the results. This package wraps functionality from the following packages: Ritchie et al. (2015) doi:10.1093/nar/gkv007, Love et al. (2014) doi:10.1186/s13059-014-0550-8, Robinson et al. (2010) doi:10.1093/bioinformatics/btp616, Korotkevich et al. (2016) arxiv:10.1101/060012, Efron et al. (2015) https://CRAN.R-project.org/package=GSA, and Gu et al. (2012) https://CRAN.R-project.org/package=CePa.

  • Version0.2.5
  • R version≥ 4.0
  • LicenseGPL-3
  • Needs compilation?No
  • Last release11/06/2024

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  • Depends3 packages
  • Imports11 packages
  • Suggests11 packages