RaceID

Identification of Cell Types, Inference of Lineage Trees, and Prediction of Noise Dynamics from Single-Cell RNA-Seq Data

CRAN Package

Application of 'RaceID' allows inference of cell types and prediction of lineage trees by the 'StemID2' algorithm (doi:10.1038/nmeth.4662). 'VarID2' is part of this package and allows quantification of biological gene expression noise at single-cell resolution (doi:10.1186/s13059-023-02974-1).

  • Version0.3.8
  • R version≥ 3.5.0
  • LicenseGPL-3
  • Needs compilation?Yes
  • Last release11/05/2024

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  • Imports25 packages
  • Suggests2 packages
  • Linking To1 package