CRAN/E | Rphylopars

Rphylopars

Phylogenetic Comparative Tools for Missing Data and Within-Species Variation

Installation

About

Tools for performing phylogenetic comparative methods for datasets with with multiple observations per species (intraspecific variation or measurement error) and/or missing data (Goolsby et al. 2017). Performs ancestral state reconstruction and missing data imputation on the estimated evolutionary model, which can be specified as Brownian Motion, Ornstein-Uhlenbeck, Early-Burst, Pagel's lambda, kappa, or delta, or a star phylogeny.

github.com/ericgoolsby/Rphylopars/wiki

Key Metrics

Version 0.3.9
Published 2022-05-09 770 days ago
Needs compilation? yes
License GPL-2
License GPL-3
CRAN checks Rphylopars results

Downloads

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Maintainer

Maintainer

Eric W. Goolsby

Authors

Eric W. Goolsby

aut / cre

Jorn Bruggeman

aut

Cecile Ane

aut

Material

README
Reference manual
Package source

In Views

MissingData

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

Rphylopars archive

Depends

ape

Imports

Rcpp
doBy
phylolm
phytools
Matrix
MASS
numDeriv

LinkingTo

Rcpp
RcppArmadillo

Reverse Suggests

RRphylo