CRAN/E | RxODE

RxODE

Facilities for Simulating from ODE-Based Models

Installation

About

Facilities for running simulations from ordinary differential equation ('ODE') models, such as pharmacometrics and other compartmental models. A compilation manager translates the ODE model into C, compiles it, and dynamically loads the object code into R for improved computational efficiency. An event table object facilitates the specification of complex dosing regimens (optional) and sampling schedules. NB: The use of this package requires both C and Fortran compilers, for details on their use with R please see Section 6.3, Appendix A, and Appendix D in the "R Administration and Installation" manual. Also the code is mostly released under GPL. The 'VODE' and 'LSODA' are in the public domain. The information is available in the inst/COPYRIGHTS.

Citation RxODE citation info
nlmixrdevelopment.github.io/RxODE/
github.com/nlmixrdevelopment/RxODE/
Copyright see file COPYRIGHTS
Bug report File report

Key Metrics

Version 1.1.5
R ≥ 4.0.0
Published 2022-03-23 817 days ago
Needs compilation? yes
License GPL (≥ 3)
CRAN checks RxODE results
Language en-US

Downloads

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Last 365 days 4.037 -44%

Maintainer

Maintainer

Wenping Wang

Authors

Matthew L. Fidler

aut

Melissa Hallow

aut

Wenping Wang

aut / cre

Zufar Mulyukov

ctb

Alan Hindmarsh

ctb

Awad H. Al-Mohy

ctb

Matt Dowle

ctb

Cleve Moler

ctb

David Cooley

ctb

Drew Schmidt

ctb

Arun Srinivasan

ctb

Ernst Hairer

ctb

Gerhard Wanner

ctb

Goro Fuji

ctb

Hadley Wickham

ctb

Jack Dongarra

ctb

Linda Petzold

ctb

Martin Maechler

ctb

Matteo Fasiolo

ctb

Morwenn

ctb

Nicholas J. Higham

ctb

Roger B. Sidje

ctb

Simon Frost

ctb

Kevin Ushey

ctb

Yu Feng

ctb

Material

README
NEWS
Reference manual
Package source

In Views

DifferentialEquations

Vignettes

RxODE ODE solving syntax

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

RxODE archive

Depends

R ≥ 4.0.0

Imports

PreciseSums ≥ 0.3
Rcpp ≥ 0.12.3
assertthat
backports
checkmate
cli ≥ 2.0.0
dparser ≥ 0.1.8
ggplot2
inline
lotri ≥ 0.3.0
magrittr
memoise
methods
rex
qs
sys
tools
utils

Suggests

spelling
Matrix
DT
covr
crayon
curl
data.table ≥1.12.4
digest
dplyr ≥ 0.8.0
ggrepel
gridExtra
htmltools
knitr
learnr
microbenchmark
nlme
remotes
rlang
rmarkdown
scales
shiny
stringi
symengine
testthat
tidyr
usethis
vdiffr
xgxr
pillar
tibble
units ≥ 0.6-0
rsconnect
devtools
patchwork

LinkingTo

dparser ≥ 1.3.1-0
PreciseSums ≥ 0.3
RcppEigen ≥0.3.3.3.0
RcppArmadillo ≥ 0.9.300.2.0
sitmo
StanHeaders ≥ 2.21.0
BH

Reverse Imports

nlmixr

Reverse Suggests

campsis
CGNM

Reverse LinkingTo

nlmixr