CRAN/E | SANvi

SANvi

Fitting Shared Atoms Nested Models via Variational Bayes

Installation

About

An efficient tool for fitting the nested common and shared atoms models using variational Bayes approximate inference for fast computation. Specifically, the package implements the common atoms model (Denti et al., 2023), its finite version (D'Angelo et al., 2023), and a hybrid finite-infinite model. All models use Gaussian mixtures with a normal-inverse-gamma prior distribution on the parameters. Additional functions are provided to help analyze the results of the fitting procedure. References: Denti, Camerlenghi, Guindani, Mira (2023) doi:10.1080/01621459.2021.1933499, D’Angelo, Canale, Yu, Guindani (2023) doi:10.1111/biom.13626.

github.com/fradenti/SANvi
Bug report File report

Key Metrics

Version 0.1.1
Published 2024-05-15 34 days ago
Needs compilation? yes
License MIT
License File
CRAN checks SANvi results
Language en-US

Downloads

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Maintainer

Maintainer

Francesco Denti

Authors

Francesco Denti

aut / cre / cph

Laura D'Angelo

aut

Material

README
NEWS
Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

SANvi archive

Depends

scales
RColorBrewer

Imports

Rcpp
matrixStats

LinkingTo

Rcpp
RcppArmadillo