CRAN/E | SAVER

SAVER

Single-Cell RNA-Seq Gene Expression Recovery

Installation

About

An implementation of a regularized regression prediction and empirical Bayes method to recover the true gene expression profile in noisy and sparse single-cell RNA-seq data. See Huang M, et al (2018) doi:10.1038/s41592-018-0033-z for more details.

Citation SAVER citation info
github.com/mohuangx/SAVER
Bug report File report

Key Metrics

Version 1.1.2
R ≥ 3.0.1
Published 2019-11-13 1678 days ago
Needs compilation? no
License GPL-2
CRAN checks SAVER results

Downloads

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Last 365 days 3.345 -15%

Maintainer

Maintainer

Mo Huang

Authors

Mo Huang

aut / cre

Nancy Zhang

aut

Mingyao Li

aut

Material

README
NEWS
Reference manual
Package source

In Views

MissingData

Vignettes

SAVER Tutorial

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

SAVER archive

Depends

R ≥ 3.0.1

Imports

glmnet
foreach
methods
iterators
doParallel
Matrix

Suggests

knitr
rmarkdown

Reverse Imports

ADImpute
scRecover