CRAN/E | SCBiclust

SCBiclust

Identifies Mean, Variance, and Hierarchically Clustered Biclusters

Installation

About

Identifies a bicluster, a submatrix of the data such that the features and observations within the submatrix differ from those not contained in submatrix, using a two-step method. In the first step, observations in the bicluster are identified to maximize the sum of weighted between cluster feature differences. The method is described in Helgeson et al. (2020) doi:10.1111/biom.13136. 'SCBiclust' can be used to identify biclusters which differ based on feature means, feature variances, or more general differences.

Key Metrics

Version 1.0.1
R ≥ 3.4.0
Published 2022-06-09 740 days ago
Needs compilation? no
License GPL-2
License GPL-3
CRAN checks SCBiclust results

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Maintainer

Maintainer

Erika S. Helgeson

Authors

Erika S. Helgeson
Qian Liu
Guanhua Chen
Michael R. Kosorok
Eric Bair

Material

Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

SCBiclust archive

Depends

R ≥ 3.4.0

Imports

sparcl
sigclust