SCRIP
An Accurate Simulator for Single-Cell RNA Sequencing Data
We provide a comprehensive scheme that is capable of simulating Single Cell RNA Sequencing data for various parameters of Biological Coefficient of Variation, busting kinetics, differential expression (DE), cell or sample groups, cell trajectory, batch effect and other experimental designs. 'SCRIP' proposed and compared two frameworks with Gamma-Poisson and Beta-Gamma-Poisson models for simulating Single Cell RNA Sequencing data. Other reference is available in Zappia et al. (2017) https://genomebiology.biomedcentral.com/articles/10.1186/s13059-017-1305-0.
- Version1.0.0
- R version≥ 4.0
- LicenseGPL-3
- Needs compilation?No
- Languageen-GB
- Last release11/19/2021
Documentation
Team
Fei Qin
Insights
Last 30 days
This package has been downloaded 161 times in the last 30 days. Now we're getting somewhere! Enough downloads to populate a lively group chat. The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 5 times.
The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.
Last 365 days
This package has been downloaded 2,225 times in the last 365 days. That's enough downloads to impress a room full of undergrads. A commendable achievement indeed. The day with the most downloads was Jan 18, 2025 with 22 downloads.
The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.
Data provided by CRAN
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Dependencies
- Imports7 packages
- Suggests2 packages