SIBERG

Systematic Identification of Bimodally Expressed Genes Using RNAseq Data

CRAN Package

Provides models to identify bimodally expressed genes from RNAseq data based on the Bimodality Index. SIBERG models the RNAseq data in the finite mixture modeling framework and incorporates mechanisms for dealing with RNAseq normalization. Three types of mixture models are implemented, namely, the mixture of log normal, negative binomial, or generalized Poisson distribution. See Tong et al. (2013) doi:10.1093/bioinformatics/bts713.


Documentation


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Insights

Last 30 days

This package has been downloaded 155 times in the last 30 days. Now we're getting somewhere! Enough downloads to populate a lively group chat. The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 3 times.

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7 downloadsFeb 16, 2025
2 downloadsFeb 17, 2025
8 downloadsFeb 18, 2025
8 downloadsFeb 19, 2025
13 downloadsFeb 20, 2025
4 downloadsFeb 21, 2025
6 downloadsFeb 22, 2025
10 downloadsFeb 23, 2025
6 downloadsFeb 24, 2025
4 downloadsFeb 25, 2025
6 downloadsFeb 26, 2025
3 downloadsFeb 27, 2025
2 downloadsFeb 28, 2025
5 downloadsMar 1, 2025
5 downloadsMar 2, 2025
4 downloadsMar 3, 2025
4 downloadsMar 4, 2025
9 downloadsMar 5, 2025
3 downloadsMar 6, 2025
4 downloadsMar 7, 2025
2 downloadsMar 8, 2025
0 downloadsMar 9, 2025
4 downloadsMar 10, 2025
7 downloadsMar 11, 2025
6 downloadsMar 12, 2025
5 downloadsMar 13, 2025
2 downloadsMar 14, 2025
10 downloadsMar 15, 2025
3 downloadsMar 16, 2025
3 downloadsMar 17, 2025
0 downloadsMar 18, 2025
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0 downloadsMar 21, 2025
0 downloadsMar 22, 2025
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The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Last 365 days

This package has been downloaded 1,954 times in the last 365 days. Now we’re talking! This work is officially 'heard of in academic circles', just like those wild research papers on synthetic bananas. The day with the most downloads was Sep 11, 2024 with 26 downloads.

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Data provided by CRAN


Binaries


Dependencies

  • Imports1 package
  • Suggests1 package