SITH
A Spatial Model of Intra-Tumor Heterogeneity
Implements a three-dimensional stochastic model of cancer growth and mutation similar to the one described in Waclaw et al. (2015) doi:10.1038/nature14971. Allows for interactive 3D visualizations of the simulated tumor. Provides a comprehensive summary of the spatial distribution of mutants within the tumor. Contains functions which create synthetic sequencing datasets from the generated tumor.
- Version1.1.0
- R version≥ 3.6.0
- LicenseGPL-2
- LicenseGPL-3
- Needs compilation?Yes
- Last release01/05/2021
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Team
Phillip B. Nicol
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- Imports2 packages
- Suggests5 packages
- Linking To1 package