CRAN/E | SOHPIE

SOHPIE

Statistical Approach via Pseudo-Value Information and Estimation

Installation

About

'SOHPIE' (pronounced as SOFIE) is a novel pseudo-value regression approach for differential co-abundance network analysis of microbiome data, which can include additional clinical covariate in the model. The full methodological details can be found in Ahn S and Datta S (2023) .

Key Metrics

Version 1.0.6
R ≥ 3.5.0
Published 2023-10-23 238 days ago
Needs compilation? no
License GPL-3
CRAN checks SOHPIE results
Language en-US

Downloads

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Maintainer

Maintainer

Seungjun Ahn

Authors

Seungjun Ahn

cre / aut / trl

Somnath Datta

ctb / ths

Material

Reference manual
Package source

Vignettes

An Introduction to SOHPIE

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

SOHPIE archive

Depends

R ≥ 3.5.0

Imports

robustbase
parallel
dplyr
fdrtool
gtools
stats

Suggests

knitr
rmarkdown
testthat ≥ 3.0.0