SRTsim
Simulator for Spatially Resolved Transcriptomics
An independent, reproducible, and flexible Spatially Resolved Transcriptomics (SRT) simulation framework that can be used to facilitate the development of SRT analytical methods for a wide variety of SRT-specific analyses. It utilizes spatial localization information to simulate SRT expression count data in a reproducible and scalable fashion. Two major simulation schemes are implemented in 'SRTsim': reference-based and reference-free.
- Version0.99.7
- R version≥ 3.5.0 methods
- LicenseGPL (≥ 3)
- Needs compilation?No
- Last release08/21/2024
Documentation
Team
Jiaqiang Zhu
Xiang Zhou
Show author detailsRolesAuthorLulu Shang
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- Imports23 packages
- Suggests5 packages