SRTsim

Simulator for Spatially Resolved Transcriptomics

CRAN Package

An independent, reproducible, and flexible Spatially Resolved Transcriptomics (SRT) simulation framework that can be used to facilitate the development of SRT analytical methods for a wide variety of SRT-specific analyses. It utilizes spatial localization information to simulate SRT expression count data in a reproducible and scalable fashion. Two major simulation schemes are implemented in 'SRTsim': reference-based and reference-free.

  • Version0.99.7
  • R version≥ 3.5.0 methods
  • LicenseGPL (≥ 3)
  • Needs compilation?No
  • Last release08/21/2024

Documentation


Team


Insights

Last 30 days

Last 365 days

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Data provided by CRAN


Binaries


Dependencies

  • Imports23 packages
  • Suggests5 packages