SmartSVA

Fast and Robust Surrogate Variable Analysis

CRAN Package

Introduces a fast and efficient Surrogate Variable Analysis algorithm that captures variation of unknown sources (batch effects) for high-dimensional data sets. The algorithm is built on the 'irwsva.build' function of the 'sva' package and proposes a revision on it that achieves an order of magnitude faster running time while trading no accuracy loss in return.

  • Version0.1.3
  • R version≥ 3.1.0
  • LicenseGPL-3
  • Needs compilation?Yes
  • Last release05/28/2017

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  • Depends4 packages
  • Imports3 packages
  • Linking To2 packages
  • Reverse Imports2 packages