TaxaNorm

Feature-Wise Normalization for Microbiome Sequencing Data

CRAN Package

A novel feature-wise normalization method based on a zero-inflated negative binomial model. This method assumes that the effects of sequencing depth vary for each taxon on their mean and also incorporates a rational link of zero probability and taxon dispersion as a function of sequencing depth. Ziyue Wang, Dillon Lloyd, Shanshan Zhao, Alison Motsinger-Reif (2023) doi:10.1101/2023.10.31.563648.

  • Version2.4
  • R versionunknown
  • LicenseGPL-3
  • Needs compilation?No
  • Last release12/12/2023

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  • Imports8 packages
  • Suggests2 packages