TaxaNorm
Feature-Wise Normalization for Microbiome Sequencing Data
A novel feature-wise normalization method based on a zero-inflated negative binomial model. This method assumes that the effects of sequencing depth vary for each taxon on their mean and also incorporates a rational link of zero probability and taxon dispersion as a function of sequencing depth. Ziyue Wang, Dillon Lloyd, Shanshan Zhao, Alison Motsinger-Reif (2023)
- Version2.4
- R version≥ 4.0.0
- LicenseGPL-3
- Needs compilation?No
- Last release12/12/2023
Documentation
Team
Dillon Lloyd
Ziyue Wang
Show author detailsRolesAuthorShanshan Zhao
Show author detailsRolesAuthor, ContributorAlison Motsinger-Reif
Show author detailsRolesAuthor, Contributor
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- Depends2 packages
- Imports14 packages
- Suggests2 packages