WhiteLabRt
Novel Methods for Reproduction Number Estimation, Back-Calculation, and Forecasting
A collection of functions related to novel methods for estimating R(t), created by the lab of Professor Laura White. Currently implemented methods include two-step Bayesian back-calculation and now-casting for line-list data with missing reporting delays, adapted in 'STAN' from Li (2021) doi:10.1371/journal.pcbi.1009210, and calculation of time-varying reproduction number assuming a flux between various adjacent states, adapted into 'STAN' from Zhou (2021) doi:10.1371/journal.pcbi.1010434.
- Version1.0.1
- R version≥ 3.4.0
- LicenseMIT
- Needs compilation?Yes
- Languageen-US
- Last release08/16/2024
Documentation
Team
Chad Milando
Tenglong Li
Show author detailsRolesContributorZhenwei Zhou
Show author detailsRolesContributorLaura White
Show author detailsRolesContributor
Insights
Last 30 days
Last 365 days
The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.
Data provided by CRAN
Binaries
Dependencies
- Imports4 packages
- Suggests2 packages
- Linking To6 packages