aIc

Testing for Compositional Pathologies in Datasets

CRAN Package

A set of tests for compositional pathologies. Tests for coherence of correlations with aIc.coherent() as suggested by (Erb et al. (2020) doi:10.1016/j.acags.2020.100026), compositional dominance of distance with aIc.dominant(), compositional perturbation invariance with aIc.perturb() as suggested by (Aitchison (1992) doi:10.1007/BF00891269) and singularity of the covariation matrix with aIc.singular(). Currently tests five data transformations: prop, clr, TMM, TMMwsp, and RLE from the R packages 'ALDEx2', 'edgeR' and 'DESeq2' (Fernandes et al (2014) doi:10.1186/2049-2618-2-15, Anders et al. (2013) doi:10.1038/nprot.2013.099).


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Insights

Last 30 days

This package has been downloaded 277 times in the last 30 days. More than a random curiosity, but not quite a blockbuster. Still, it's gaining traction! The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 10 times.

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0 downloadsMar 2, 2025
9 downloadsMar 3, 2025
12 downloadsMar 4, 2025
12 downloadsMar 5, 2025
8 downloadsMar 6, 2025
12 downloadsMar 7, 2025
4 downloadsMar 8, 2025
8 downloadsMar 9, 2025
10 downloadsMar 10, 2025
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14 downloadsMar 17, 2025
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19 downloadsMar 20, 2025
10 downloadsMar 21, 2025
5 downloadsMar 22, 2025
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3 downloadsMar 25, 2025
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5 downloadsMar 31, 2025
10 downloadsApr 1, 2025
0 downloadsApr 2, 2025
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0 downloadsApr 5, 2025
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The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Last 365 days

This package has been downloaded 3,564 times in the last 365 days. Now we’re talking! This work is officially 'heard of in academic circles', just like those wild research papers on synthetic bananas. The day with the most downloads was Aug 28, 2024 with 60 downloads.

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Data provided by CRAN


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Dependencies

  • Imports4 packages
  • Suggests2 packages