alakazam
Immunoglobulin Clonal Lineage and Diversity Analysis
Provides methods for high-throughput adaptive immune receptor repertoire sequencing (AIRR-Seq; Rep-Seq) analysis. In particular, immunoglobulin (Ig) sequence lineage reconstruction, lineage topology analysis, diversity profiling, amino acid property analysis and gene usage. Citations: Gupta and Vander Heiden, et al (2017)
- Version1.3.0
- R version≥ 4.0
- LicenseAGPL-3
- Needs compilation?Yes
- alakazam citation info
- Last release09/30/2023
Documentation
Team
Susanna Marquez
Namita Gupta
Show author detailsRolesAuthorNima Nouri
Show author detailsRolesAuthorRuoyi Jiang
Show author detailsRolesAuthorJulian Zhou
Show author detailsRolesAuthorKenneth Hoehn
Show author detailsRolesAuthorDaniel Gadala-Maria
Show author detailsRolesContributorEdel Aron
Show author detailsRolesContributorCole Jensen
Show author detailsRolesContributorJason Vander Heiden
Show author detailsRolesAuthorSteven Kleinstein
Show author detailsRolesAuthor, Copyright holder
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- Depends2 packages
- Imports19 packages
- Suggests3 packages
- Linking To1 package
- Reverse Imports6 packages