bbmix
Bayesian Model for Genotyping using RNA-Seq
The method models RNA-seq reads using a mixture of 3 beta-binomial distributions to generate posterior probabilities for genotyping bi-allelic single nucleotide polymorphisms. Elena Vigorito, Anne Barton, Costantino Pitzalis, Myles J. Lewis and Chris Wallace (2023) doi:10.1093/bioinformatics/btad393 "BBmix: a Bayesian beta-binomial mixture model for accurate genotyping from RNA-sequencing."
- Version1.0.0
- R versionunknown
- LicenseGPL-2
- Needs compilation?Yes
- Last release07/06/2023
Documentation
Team
Elena Vigorito
Chris Wallace
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Last 30 days
This package has been downloaded 291 times in the last 30 days. Now we're getting somewhere! Enough downloads to populate a lively group chat. The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 8 times.
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Last 365 days
This package has been downloaded 3,161 times in the last 365 days. That's enough downloads to impress a room full of undergrads. A commendable achievement indeed. The day with the most downloads was Jul 23, 2024 with 35 downloads.
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Dependencies
- Imports5 packages
- Suggests2 packages
- Linking To5 packages