breakaway
Species Richness Estimation and Modeling
Understanding the drivers of microbial diversity is an important frontier of microbial ecology, and investigating the diversity of samples from microbial ecosystems is a common step in any microbiome analysis. 'breakaway' is the premier package for statistical analysis of microbial diversity. 'breakaway' implements the latest and greatest estimates of species richness, described in Willis and Bunge (2015) doi:10.1111/biom.12332, Willis et al. (2017) doi:10.1111/rssc.12206, and Willis (2016) doi:10.48550/arXiv.1604.02598, as well as the most commonly used estimates, including the objective Bayes approach described in Barger and Bunge (2010) doi:10.1214/10-BA527.
- Version4.8.4
- R version≥ 3.5.0
- LicenseGPL-2
- Needs compilation?No
- Willis and Bunge (2015)
- Willis et al. (2017)
- Willis (2016)
- Barger and Bunge (2010)
- Last release11/22/2022
Documentation
Team
Amy D Willis
Bryan D Martin
Show author detailsRolesAuthorPauline Trinh
Show author detailsRolesAuthorSarah Teichman
Show author detailsRolesAuthorDavid Clausen
Show author detailsRolesAuthorKathryn Barger
Show author detailsRolesAuthorJohn Bunge
Show author detailsRolesAuthor
Insights
Last 30 days
This package has been downloaded 472 times in the last 30 days. Enough downloads to make a small wave in the niche community. The curiosity is spreading! The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 6 times.
The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.
Last 365 days
This package has been downloaded 11,740 times in the last 365 days. The academic equivalent of having a dedicated subreddit. There are fans, and maybe even a few trolls! The day with the most downloads was Jun 02, 2024 with 357 downloads.
The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.
Data provided by CRAN
Binaries
Dependencies
- Imports5 packages
- Suggests7 packages