ccRemover
Removes the Cell-Cycle Effect from Single-Cell RNA-Sequencing Data
Implements a method for identifying and removing the cell-cycle effect from scRNA-Seq data. The description of the method is in Barron M. and Li J. (2016) doi:10.1038/srep33892. Identifying and removing the cell-cycle effect from single-cell RNA-Sequencing data. Submitted. Different from previous methods, ccRemover implements a mechanism that formally tests whether a component is cell-cycle related or not, and thus while it often thoroughly removes the cell-cycle effect, it preserves other features/signals of interest in the data.
- Version1.0.4
- R versionunknown
- LicenseGPL-3
- Needs compilation?No
- Barron M. and Li J. (2016) doi:10.1038/srep33892
- Last release08/19/2017
Documentation
Team
Jun Li
Martin Barron
Show author detailsRolesAuthor
Insights
Last 30 days
Last 365 days
The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.
Data provided by CRAN
Binaries
Dependencies
- Suggests2 packages