clusterMI

Cluster Analysis with Missing Values by Multiple Imputation

CRAN Package

Allows clustering of incomplete observations by addressing missing values using multiple imputation. For achieving this goal, the methodology consists in three steps, following Audigier and Niang 2022 doi:10.1007/s11634-022-00519-1. I) Missing data imputation using dedicated models. Four multiple imputation methods are proposed, two are based on joint modelling and two are fully sequential methods, as discussed in Audigier et al. (2021) doi:10.48550/arXiv.2106.04424. II) cluster analysis of imputed data sets. Six clustering methods are available (distances-based or model-based), but custom methods can also be easily used. III) Partition pooling. The set of partitions is aggregated using Non-negative Matrix Factorization based method. An associated instability measure is computed by bootstrap (see Fang, Y. and Wang, J., 2012 doi:10.1016/j.csda.2011.09.003). Among applications, this instability measure can be used to choose a number of clusters with missing values. The package also proposes several diagnostic tools to tune the number of imputed data sets, to tune the number of iterations in fully sequential imputation, to check the fit of imputation models, etc.


Documentation


Team


Insights

Last 30 days

This package has been downloaded 411 times in the last 30 days. More than a random curiosity, but not quite a blockbuster. Still, it's gaining traction! The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 18 times.

Sun
Mon
Tue
Wed
Thu
Fri
Sat
11 downloadsMar 16, 2025
11 downloadsMar 17, 2025
22 downloadsMar 18, 2025
15 downloadsMar 19, 2025
18 downloadsMar 20, 2025
15 downloadsMar 21, 2025
7 downloadsMar 22, 2025
17 downloadsMar 23, 2025
22 downloadsMar 24, 2025
7 downloadsMar 25, 2025
10 downloadsMar 26, 2025
14 downloadsMar 27, 2025
28 downloadsMar 28, 2025
4 downloadsMar 29, 2025
8 downloadsMar 30, 2025
7 downloadsMar 31, 2025
15 downloadsApr 1, 2025
12 downloadsApr 2, 2025
25 downloadsApr 3, 2025
9 downloadsApr 4, 2025
9 downloadsApr 5, 2025
3 downloadsApr 6, 2025
20 downloadsApr 7, 2025
13 downloadsApr 8, 2025
13 downloadsApr 9, 2025
13 downloadsApr 10, 2025
11 downloadsApr 11, 2025
29 downloadsApr 12, 2025
5 downloadsApr 13, 2025
18 downloadsApr 14, 2025
0 downloadsApr 15, 2025
0 downloadsApr 16, 2025
0 downloadsApr 17, 2025
0 downloadsApr 18, 2025
0 downloadsApr 19, 2025
3
29

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Last 365 days

This package has been downloaded 6,342 times in the last 365 days. Impressive! The kind of number that makes colleagues ask, 'How did you do it?' The day with the most downloads was May 19, 2024 with 70 downloads.

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Data provided by CRAN


Binaries


Dependencies

  • Imports19 packages
  • Suggests8 packages
  • Linking To2 packages