clustermole
Unbiased Single-Cell Transcriptomic Data Cell Type Identification
Assignment of cell type labels to single-cell RNA sequencing (scRNA-seq) clusters is often a time-consuming process that involves manual inspection of the cluster marker genes complemented with a detailed literature search. This is especially challenging when unexpected or poorly described populations are present. The clustermole R package provides methods to query thousands of human and mouse cell identity markers sourced from a variety of databases.
- Version1.1.1
- R version≥ 4.3
- LicenseMIT
- LicenseLICENSE
- Needs compilation?No
- Last release01/08/2024
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Igor Dolgalev
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- Imports5 packages
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