clustur

Clustering

CRAN Package

A tool that implements the clustering algorithms from 'mothur' (Schloss PD et al. (2009) doi:10.1128/AEM.01541-09). 'clustur' make use of the cluster() and make.shared() command from 'mothur'. Our cluster() function has five different algorithms implemented: 'OptiClust', 'furthest', 'nearest', 'average', and 'weighted'. 'OptiClust' is an optimized clustering method for Operational Taxonomic Units, and you can learn more here, (Westcott SL, Schloss PD (2017) doi:10.1128/mspheredirect.00073-17). The make.shared() command is always applied at the end of the clustering command. This functionality allows us to generate and create clustering and abundance data efficiently.

  • Version0.1.1
  • R versionunknown
  • LicenseMIT
  • Needs compilation?Yes
  • Last release11/25/2024

Documentation


Team


Insights

Last 30 days

Last 365 days

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Data provided by CRAN


Binaries


Dependencies

  • Imports2 packages
  • Suggests4 packages
  • Linking To2 packages