CRAN/E | coda

coda

Output Analysis and Diagnostics for MCMC

Installation

About

Provides functions for summarizing and plotting the output from Markov Chain Monte Carlo (MCMC) simulations, as well as diagnostic tests of convergence to the equilibrium distribution of the Markov chain.

Citation coda citation info

Key Metrics

Version 0.19-4.1
R ≥ 2.14.0
Published 2024-01-31 175 days ago
Needs compilation? no
License GPL-2
License GPL-3
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Maintainer

Maintainer

Martyn Plummer

Authors

Martyn Plummer

aut / cre / trl

Nicky Best

aut

Kate Cowles

aut

Karen Vines

aut

Deepayan Sarkar

aut

Douglas Bates

aut

Russell Almond

aut

Arni Magnusson

aut

Material

README
ChangeLog
Reference manual
Package source

In Views

Bayesian
GraphicalModels

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

coda archive

Depends

R ≥ 2.14.0

Imports

lattice

Reverse Depends

adaptMCMC
ArchaeoChron
ArchaeoPhases
bamlss
BayesARIMAX
bayesDccGarch
BayesFactor
BayesLCA
bayesSurv
BayesTwin
BayLum
BAYSTAR
bhm
bhpm
bkmrhat
blatent
BMAmevt
boral
BSPADATA
bvartools
c212
coalescentMCMC
cplm
cubfits
dclone
DPP
elrm
endorse
EpiILM
EpiILMCT
FME
gaga
gconsensus
gemtc
gfiExtremes
HelpersMG
Hmsc
icenReg
InSilicoVA
ISEtools
lira
mcgibbsit
MCMC.OTU
MCMC.qpcr
MCMCglmm
MCMCpack
mcmcplots
MCMCtreeR
metropolis
multiocc
Load all 67 items
(warning: might lead to performance issues and take some time)

Reverse Imports

adaptsmoFMRI
agRee
AHMbook
aihuman
altmeta
ammiBayes
aphylo
apollo
arm
auRoc
BaalChIP
baker
BAMBI
bamp
banocc
BANOVA
bartcs
BASiCS
BayesBEKK
BayesBinMix
bayesbr
BayesCACE
BayesComm
bayescount
BayesFM
bayesGARCH
BayesGWQS
BayesianFactorZoo
BayesianTools
bayesLife
bayeslm
BayesLN
BayesMassBal
BayesMFSurv
bayesMig
bayesmix
bayesMRM
BayesOrdDesign
bayesPO
BayesPostEst
Bayesrel
BayesRS
BayesSpace
bayesTFR
BayesTools
bayesvl
BayesX
BCClong
bcgam
BCHM
Load all 268 items
(warning: might lead to performance issues and take some time)

Reverse Suggests

AdMit
afdx
airGR
amen
AnaCoDa
BaM
bandle
bayesanova
bayesianVARs
bayesImageS
bayest
BCEA
BGGE
bmstdr
broom
bsreg
BVAR
ContRespPP
embryogrowth
emmeans
ergmito
factorstochvol
gap
ggmcmc
glmmfields
glmmTMB
handwriter
HDInterval
icensBKL
LAM
lmls
LNIRT
Luminescence
MBNMAdose
mcmcderive
mcmcensemble
mcmcsae
metamisc
miceadds
nimbleAPT
nimbleNoBounds
nimbleSCR
nmathresh
noisyCE2
outbreaker2
parameters
pscl
purgeR
R2BayesX
rater
Load all 69 items
(warning: might lead to performance issues and take some time)

Reverse Enhances

XDE